| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/2.10.1+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastn_wrapper/0.0.11 |
| ncbi_blastn_wrapper |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| blast | 2.10.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
query: rhodopsin_nucs.fasta db_opts|database: db_opts|subject: three_human_mRNA.fasta db_opts|db_opts_selector: file evalue_cutoff: 1e-40 output|out_format: 5 adv_opts|adv_opts_selector: basic |
name: value |
rhodopsin_nucs.fasta three_human_mRNA.fasta value |
| Test-2 |
query: rhodopsin_nucs.fasta db_opts|database: db_opts|subject: three_human_mRNA.fasta db_opts|db_opts_selector: file evalue_cutoff: 1e-40 output|out_format: 6 adv_opts|adv_opts_selector: basic |
name: value |
rhodopsin_nucs.fasta three_human_mRNA.fasta value |
| Test-3 |
query: rhodopsin_nucs.fasta db_opts|database: db_opts|subject: three_human_mRNA.fasta.gz db_opts|db_opts_selector: file evalue_cutoff: 1e-40 output|out_format: 6 adv_opts|adv_opts_selector: basic |
name: value |
rhodopsin_nucs.fasta three_human_mRNA.fasta.gz value |
| Test-4 |
query: rhodopsin_nucs.fasta db_opts|database: db_opts|subject: three_human_mRNA.fasta db_opts|db_opts_selector: file evalue_cutoff: 1e-40 output|std_cols: ['qseqid', 'sseqid', 'pident'] output|ext_cols: ['qlen', 'slen'] output|out_format: cols adv_opts|adv_opts_selector: basic |
name: value |
rhodopsin_nucs.fasta three_human_mRNA.fasta value |
| Test-5 |
query: chimera.fasta db_opts|database: three_human_mRNA db_opts|db_opts_selector: db output|out_format: 6 adv_opts|max_hits: 1 adv_opts|adv_opts_selector: advanced |
name: value |
chimera.fasta value |
| Test-6 |
query: chimera.fasta db_opts|database: three_human_mRNA db_opts|db_opts_selector: db output|out_format: 0 adv_opts|max_hits: 1 adv_opts|adv_opts_selector: advanced |
name: value |
chimera.fasta value |
| Test-7 |
query: chimera.fasta db_opts|database: three_human_mRNA db_opts|db_opts_selector: db output|out_format: 6 |
name: value |
chimera.fasta value |
| Test-8 |
query: chimera.fasta db_opts|database: rhodopsin_nucs db_opts|db_opts_selector: db output|out_format: 6 |
name: value |
chimera.fasta value |
| Test-9 |
query: chimera.fasta db_opts|database: rhodopsin_nucs db_opts|db_opts_selector: db output|out_format: 6 adv_opts|max_hsps: 1 adv_opts|adv_opts_selector: advanced |
name: value |
chimera.fasta value |
| Test-10 |
query: chimera.fasta db_opts|database: ['three_human_mRNA', 'rhodopsin_nucs'] db_opts|db_opts_selector: db output|out_format: 6 |
name: value |
chimera.fasta value |