| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/2.10.1+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/2.9.0+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/2.7.1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.3.3 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.3.1 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.3.0 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.2.01 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.2.00 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.1.08 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.1.07 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.1.06 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.1.05 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.1.04 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.1.03 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.1.01 |
| toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_convert2blastmask_wrapper/0.1.00 |
| ncbi_convert2blastmask_wrapper |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| blast | 2.10.1 | package |
| Additional information about this tool |
## The command is a Cheetah template which allows some Python based syntax.
## Lines starting hash hash are comments. Galaxy will turn newlines into spaces
convert2blastmask
-in '$infile'
-masking_algorithm '$masking_algorithm'
-masking_options '$masking_options'
$parse_seqids
-out '$outfile'
-outfmt $outformat
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
infile: four_human_proteins_masked.fasta masking_algorithm: seg masking_options: window=12; locut=2.2; hicut=2.5 parse_seqids: True outformat: maskinfo_asn1_bin |
name: value |
four_human_proteins_masked.fasta value |
| Test-2 |
infile: four_human_proteins_masked.fasta masking_algorithm: seg masking_options: window=12; locut=2.2; hicut=2.5 parse_seqids: True outformat: maskinfo_asn1_text |
name: value |
four_human_proteins_masked.fasta value |