Repository revision
29:5edc472ec434

Repository 'ncbi_blast_plus'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus

NCBI BLAST+ dustmasker tool metadata
Miscellaneous
masks low complexity regions
ncbi_dustmasker_wrapper
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_dustmasker_wrapper/2.10.1+galaxy0
2.10.1+galaxy0
dustmasker -version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_dustmasker_wrapper/2.10.1+galaxy1
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_dustmasker_wrapper/2.10.1+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_dustmasker_wrapper/2.9.0+galaxy0
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_dustmasker_wrapper/2.7.1+galaxy0
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_dustmasker_wrapper/0.3.3
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_dustmasker_wrapper/0.0.22
ncbi_dustmasker_wrapper
Requirements (dependencies defined in the <requirements> tag set)
name version type
blast 2.10.1 package
Functional tests
name inputs outputs required files
Test-1 db_opts|subject: three_human_mRNA.fasta
db_opts|db_opts_selector: file
window: 64
level: 20
linker: 1
outformat: fasta
name: value
three_human_mRNA.fasta
value
Test-2 db_opts|subject: three_human_mRNA.fasta
db_opts|db_opts_selector: file
window: 64
level: 20
linker: 1
outformat: maskinfo_asn1_bin
name: value
three_human_mRNA.fasta
value
Test-3 db_opts|subject: three_human_mRNA.fasta
db_opts|db_opts_selector: file
window: 64
level: 20
linker: 1
outformat: maskinfo_asn1_text
name: value
three_human_mRNA.fasta
value