Repository revision
29:5edc472ec434

Repository 'ncbi_blast_plus'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus

NCBI BLAST+ makeblastdb tool metadata
Miscellaneous
Make BLAST database
ncbi_makeblastdb
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/2.10.1+galaxy0
2.10.1+galaxy0
makeblastdb -version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/2.10.1+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.0.1
ncbi_makeblastdb
Requirements (dependencies defined in the <requirements> tag set)
name version type
blast 2.10.1 package
Functional tests
name inputs outputs required files
Test-1 dbtype: prot
input_file: four_human_proteins.fasta
title: Just 4 human proteins
parse_seqids: False
hash_index: True
name: value
four_human_proteins.fasta
value
Test-2 dbtype: prot
input_file: four_human_proteins.fasta
title: Just 4 human proteins
parse_seqids: False
hash_index: True
tax|taxid: 9606
tax|taxselect: id
name: value
four_human_proteins.fasta
value
Test-3 dbtype: prot
input_file: four_human_proteins.fasta
title: Just 4 human proteins
parse_seqids: False
hash_index: True
mask_data_file: segmasker_four_human.maskinfo-asn1
name: value
four_human_proteins.fasta
segmasker_four_human.maskinfo-asn1
value
Test-4 dbtype: nucl
input_file: three_human_mRNA.fasta.gz
title: Just 3 human mRNA sequences
parse_seqids: False
hash_index: True
tax|taxid: 9606
tax|taxselect: id
name: value
three_human_mRNA.fasta.gz
value