Repository revision
21:7538e2bfcd41

Repository 'ncbi_blast_plus'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus

NCBI BLAST+ makeblastdb tool metadata
Miscellaneous
Make BLAST database
ncbi_makeblastdb
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.2.00
0.2.00
makeblastdb -version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.2.01
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.2.00 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.08
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.07
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.06
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.05
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.04
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.03
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.01
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.00
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.0.22
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.0.5
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.0.4
toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.0.1
ncbi_makeblastdb
Requirements (dependencies defined in the <requirements> tag set)
name version type
blast 2.5.0 package
Functional tests
name inputs outputs required files
Test-1 dbtype: prot
hash_index: True
parse_seqids: False
input_file: four_human_proteins.fasta
title: Just 4 human proteins
attributes: name
four_human_proteins.fasta
name
Test-2 tax|taxid: 9606
title: Just 4 human proteins
dbtype: prot
hash_index: True
tax|taxselect: id
input_file: four_human_proteins.fasta
parse_seqids: False
attributes: name
four_human_proteins.fasta
name
Test-3 mask_data_file: segmasker_four_human.maskinfo-asn1
input_file: four_human_proteins.fasta
dbtype: prot
hash_index: True
title: Just 4 human proteins
parse_seqids: False
attributes: name
four_human_proteins.fasta
segmasker_four_human.maskinfo-asn1
name
Test-4 tax|taxid: 9606
title: Just 3 human mRNA sequences
dbtype: nucl
hash_index: True
tax|taxselect: id
input_file: three_human_mRNA.fasta
parse_seqids: False
attributes: name
three_human_mRNA.fasta
name