| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_feature_selection/sklearn_feature_selection/1.0.8.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_feature_selection/sklearn_feature_selection/1.0.7.12 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_feature_selection/sklearn_feature_selection/1.0.7.10 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_feature_selection/sklearn_feature_selection/1.0.0.4.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_feature_selection/sklearn_feature_selection/1.0.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_feature_selection/sklearn_feature_selection/0.9.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_feature_selection/sklearn_feature_selection/0.9 |
| sklearn_feature_selection |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python | 3.6 | package |
| Galaxy-ML | 0.7.12 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
fs_algorithm_selector|model_inputter|estimator_selector|text_params: n_estimators=10, random_state=10 input_options|infile2: regression_train.tabular input_options|infile1: regression_train.tabular fs_algorithm_selector|model_inputter|estimator_selector|selected_module: ensemble input_options|header2: False input_options|header1: False fs_algorithm_selector|model_inputter|estimator_selector|selected_estimator: RandomForestRegressor input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5'] fs_algorithm_selector|selected_algorithm: SelectFromModel input_options|column_selector_options_2|col2: 6 fs_algorithm_selector|model_inputter|input_mode: new |
attributes: name |
regression_train.tabular name |
| Test-2 |
input_options|infile2: regression_y.tabular input_options|infile1: regression_X.tabular fs_algorithm_selector|options|param: 20 input_options|header2: True input_options|header1: True input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17'] fs_algorithm_selector|selected_algorithm: GenericUnivariateSelect input_options|column_selector_options_2|col2: 1 |
attributes: name |
regression_X.tabular regression_y.tabular name |
| Test-3 |
input_options|infile2: regression_y.tabular input_options|infile1: regression_X.tabular input_options|header2: True input_options|header1: True input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17'] fs_algorithm_selector|selected_algorithm: SelectPercentile input_options|column_selector_options_2|col2: 1 |
attributes: name |
regression_X.tabular regression_y.tabular name |
| Test-4 |
input_options|infile2: regression_y.tabular input_options|infile1: regression_X.tabular input_options|header2: True input_options|header1: True input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17'] fs_algorithm_selector|selected_algorithm: SelectKBest input_options|column_selector_options_2|col2: 1 |
attributes: name |
regression_X.tabular regression_y.tabular name |
| Test-5 |
input_options|infile2: regression_y.tabular input_options|infile1: regression_X.tabular fs_algorithm_selector|options|alpha: 0.05 input_options|header2: True input_options|header1: True input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17'] fs_algorithm_selector|selected_algorithm: SelectFpr input_options|column_selector_options_2|col2: 1 |
attributes: name |
regression_X.tabular regression_y.tabular name |
| Test-6 |
input_options|infile2: regression_y.tabular input_options|infile1: regression_X.tabular fs_algorithm_selector|options|alpha: 0.05 input_options|header2: True input_options|header1: True input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17'] fs_algorithm_selector|selected_algorithm: SelectFdr input_options|column_selector_options_2|col2: 1 |
attributes: name |
regression_X.tabular regression_y.tabular name |
| Test-7 |
input_options|infile2: regression_y.tabular input_options|infile1: regression_X.tabular fs_algorithm_selector|options|alpha: 0.05 input_options|header2: True input_options|header1: True input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17'] fs_algorithm_selector|selected_algorithm: SelectFwe input_options|column_selector_options_2|col2: 1 |
attributes: name |
regression_X.tabular regression_y.tabular name |
| Test-8 |
fs_algorithm_selector|estimator_selector|selected_estimator: RandomForestRegressor input_options|infile2: regression_train.tabular input_options|infile1: regression_train.tabular input_options|header2: False input_options|header1: False fs_algorithm_selector|estimator_selector|text_params: n_estimators=10, random_state=10 input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5'] fs_algorithm_selector|selected_algorithm: RFE input_options|column_selector_options_2|col2: 6 fs_algorithm_selector|estimator_selector|selected_module: ensemble |
attributes: name |
regression_train.tabular name |
| Test-9 |
fs_algorithm_selector|estimator_selector|selected_estimator: RandomForestRegressor input_options|infile2: regression_train.tabular input_options|infile1: regression_train.tabular input_options|header2: False input_options|header1: False fs_algorithm_selector|estimator_selector|text_params: n_estimators=10, random_state=10 input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5'] fs_algorithm_selector|selected_algorithm: RFECV input_options|column_selector_options_2|col2: 6 fs_algorithm_selector|estimator_selector|selected_module: ensemble |
attributes: name |
regression_train.tabular name |
| Test-10 |
fs_algorithm_selector|options|threshold: 0.1 input_options|infile2: regression_y.tabular input_options|infile1: regression_X.tabular input_options|header2: True input_options|header1: True input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17'] fs_algorithm_selector|selected_algorithm: VarianceThreshold input_options|column_selector_options_2|col2: 1 |
attributes: name |
regression_X.tabular regression_y.tabular name |
| Test-11 |
fs_algorithm_selector|options|k: 3 input_options|infile2: test3.tabular input_options|infile1: test3.tabular input_options|header2: True input_options|column_selector_options_1|selected_column_selector_option: all_but_by_header_name input_options|header1: True input_options|column_selector_options_1|col1: target fs_algorithm_selector|selected_algorithm: SelectKBest input_options|column_selector_options_2|selected_column_selector_option2: by_header_name input_options|column_selector_options_2|col2: target |
attributes: name |
test3.tabular name |
| Test-12 |
input_options|infile2: regression_train.tabular input_options|infile1: regression_train.tabular fs_algorithm_selector|model_inputter|fitted_estimator: rfr_model01 input_options|header2: False input_options|header1: False input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5'] fs_algorithm_selector|selected_algorithm: SelectFromModel input_options|column_selector_options_2|col2: 1 fs_algorithm_selector|model_inputter|input_mode: prefitted |
attributes: name |
rfr_model01 regression_train.tabular name |
| Test-13 |
input_options|infile1: regression_X.tabular fs_algorithm_selector|estimator_selector|selected_estimator: RandomForestRegressor fs_algorithm_selector|options|cv_selector|groups_selector|header_g: True fs_algorithm_selector|options|cv_selector|selected_cv: GroupShuffleSplit input_options|header2: True input_options|header1: True fs_algorithm_selector|estimator_selector|text_params: n_estimators=10, random_state=10 fs_algorithm_selector|estimator_selector|selected_module: ensemble input_options|column_selector_options_1|col1: ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17'] fs_algorithm_selector|selected_algorithm: RFECV fs_algorithm_selector|options|cv_selector|random_state: 0 input_options|column_selector_options_2|col2: 1 input_options|infile2: regression_y.tabular |
attributes: name |
regression_X.tabular regression_y.tabular name |