| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/cp_overlay_outlines/cp_overlay_outlines/3.1.9+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/cp_overlay_outlines/cp_overlay_outlines/3.1.9+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/cp_overlay_outlines/cp_overlay_outlines/3.1.9 |
| cp_overlay_outlines |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| python | 3.7 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_pipeline: common.cppipe con_blank_img|image_to_outline: OrigGray con_blank_img|con_display_mode|rpt_obj_to_display_0|obj_to_display: Embryos con_blank_img|con_display_mode|rpt_obj_to_display_0|outline_color: #FF0000 con_blank_img|con_display_mode|display_mode: Color con_blank_img|blank_img: No name_output_image: OutlineImage howto_outline: Inner |
name: value |
common.cppipe value |
| Test-2 |
input_pipeline: common.cppipe con_blank_img|con_display_mode|rpt_obj_to_display_0|obj_to_display: DNA con_blank_img|con_display_mode|rpt_obj_to_display_1|obj_to_display: DNA1 con_blank_img|con_display_mode|display_mode: Grayscale con_blank_img|blank_img: Yes name_output_image: OutputImage howto_outline: Outer |
name: value |
common.cppipe value |
| Test-3 |
input_pipeline: common.cppipe con_blank_img|con_display_mode|rpt_obj_to_display_0|obj_to_display: DNA1 con_blank_img|con_display_mode|rpt_obj_to_display_0|outline_color: #548dd4 con_blank_img|con_display_mode|rpt_obj_to_display_1|obj_to_display: DNA3 con_blank_img|con_display_mode|rpt_obj_to_display_1|outline_color: #000000 con_blank_img|con_display_mode|display_mode: Color con_blank_img|blank_img: Yes name_output_image: OutputImage howto_outline: Inner |
name: value |
common.cppipe value |
| Test-4 |
input_pipeline: common.cppipe con_blank_img|image_to_outline: DNA1 con_blank_img|con_display_mode|method_brightness: Max possible con_blank_img|con_display_mode|rpt_obj_to_display_0|obj_to_display: Object1 con_blank_img|con_display_mode|rpt_obj_to_display_1|obj_to_display: Object2 con_blank_img|con_display_mode|display_mode: Grayscale con_blank_img|blank_img: No name_output_image: OutputImage howto_outline: Thick |
name: value |
common.cppipe value |