Repository revision
0:b2ce45417d9e

Repository 'trinity_stats'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/trinity_stats

Trinity Stats tool metadata
Miscellaneous
trinity_stats
toolshed.g2.bx.psu.edu/repos/iuc/trinity_stats/trinity_stats/2.15.1+galaxy0
2.15.1+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/trinity_stats/trinity_stats/2.15.1+galaxy0 (this tool)
trinity_stats
Requirements (dependencies defined in the <requirements> tag set)
name version type
trinity 2.15.1 package
Additional information about this tool
#if $input.ext.endswith(".gz")
        gunzip -c '$input' > input &&
    #else
        ln -s '$input' input &&
    #end if
    TrinityStats.pl input  > '$statsfile'
    
    
None
False
Functional tests
name inputs outputs required files
Test-1 input: count/contig_exn50_statistic/Trinity.fasta
name: value
count/contig_exn50_statistic/Trinity.fasta
value
Test-2 input: count/contig_exn50_statistic/Trinity.fasta.gz
name: value
count/contig_exn50_statistic/Trinity.fasta.gz
value