Repository revision
7:951cc7b6fca6

Repository 'qiime_compare_categories'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/qiime_compare_categories

Analyze statistical significance of sample groupings tool metadata
Miscellaneous
using distance matrices (compare_categories)
qiime_compare_categories
toolshed.g2.bx.psu.edu/repos/iuc/qiime_compare_categories/qiime_compare_categories/1.9.1.0
1.9.1.0
compare_categories.py --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/qiime_compare_categories/qiime_compare_categories/1.9.1.0 (this tool)
qiime_compare_categories
Requirements (dependencies defined in the <requirements> tag set)
name version type
qiime 1.9.1 package
r-optparse 1.3.2 package
r-vegan 2.3_4 package
r-base 3.3 package
Functional tests
name inputs outputs required files
Test-1 num_permutations: 999
input_dm: compare_categories/unweighted_unifrac_dm.txt
mapping_file: compare_categories/map.txt
method: adonis
categories: Treatment
attributes: name
compare_categories/unweighted_unifrac_dm.txt
compare_categories/map.txt
name
Test-2 num_permutations: 99
input_dm: compare_categories/unweighted_unifrac_dm.txt
mapping_file: compare_categories/map.txt
method: dbrda
categories: Treatment
attributes: name
attributes: name
compare_categories/unweighted_unifrac_dm.txt
compare_categories/map.txt
name