Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/scanpy_remove_confounders/scanpy_remove_confounders/1.9.6+galaxy0 |
toolshed.g2.bx.psu.edu/repos/iuc/scanpy_remove_confounders/scanpy_remove_confounders/1.7.1+galaxy0 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/scanpy_remove_confounders/scanpy_remove_confounders/1.4.4.post1+galaxy3 |
toolshed.g2.bx.psu.edu/repos/iuc/scanpy_remove_confounders/scanpy_remove_confounders/1.4.4.post1+galaxy2 |
toolshed.g2.bx.psu.edu/repos/iuc/scanpy_remove_confounders/scanpy_remove_confounders/1.4.4.post1+galaxy1 |
toolshed.g2.bx.psu.edu/repos/iuc/scanpy_remove_confounders/scanpy_remove_confounders/1.4.4.post1 |
toolshed.g2.bx.psu.edu/repos/iuc/scanpy_remove_confounders/scanpy_remove_confounders/1.4.4 |
toolshed.g2.bx.psu.edu/repos/iuc/scanpy_remove_confounders/scanpy_remove_confounders/1.4 |
scanpy_remove_confounders |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
scanpy | 1.7.1 | package |
loompy | 2.0.17 | package |
leidenalg | 0.8.3 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
adata: krumsiek11.h5ad method|keys: cell_type method|method: pp.regress_out advanced_common|show_log: True |
name: value name: value |
krumsiek11.h5ad value |
Test-2 |
adata: blobs.h5ad method|key: blobs method|method: pp.combat advanced_common|show_log: True |
name: value name: value |
blobs.h5ad value |