| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/taxonomy_filter_refseq/taxonomy_filter_refseq/0.3.0+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/taxonomy_filter_refseq/taxonomy_filter_refseq/0.1.4+galaxy0 |
| taxonomy_filter_refseq |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| rust-ncbitaxonomy | 0.3.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
taxonomy|names: sample_tree_names.dmp taxonomy|taxonomy_source: history refseq|history_refseq: sample_refseq.fasta taxonomy|nodes: sample_tree_nodes.dmp refseq|refseq_source: history ancestor_name: unclassified bacterial viruses |
attributes: name |
sample_tree_nodes.dmp sample_tree_names.dmp sample_refseq.fasta name |
| Test-2 |
taxonomy|taxonomy_table: 2019-01-01 no_predicted: False refseq|cached_refseq: refseq_sample taxonomy|taxonomy_source: cached refseq|refseq_source: cached no_curated: False ancestor_name: unclassified bacterial viruses |
attributes: name |
name |
| Test-3 |
no_predicted: True taxonomy|names: sample_tree_names.dmp taxonomy|taxonomy_source: history refseq|history_refseq: sample_refseq.fasta refseq|refseq_source: history taxonomy|nodes: sample_tree_nodes.dmp no_curated: False ancestor_name: unclassified bacterial viruses |
attributes: name |
sample_tree_nodes.dmp sample_tree_names.dmp sample_refseq.fasta name |
| Test-4 |
no_predicted: False taxonomy|names: sample_tree_names.dmp taxonomy|taxonomy_source: history refseq|history_refseq: sample_refseq.fasta refseq|refseq_source: history taxonomy|nodes: sample_tree_nodes.dmp no_curated: True ancestor_name: unclassified bacterial viruses |
attributes: name |
sample_tree_nodes.dmp sample_tree_names.dmp sample_refseq.fasta name |