Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/ivar_removereads/ivar_removereads/1.3.1+galaxy1 |
toolshed.g2.bx.psu.edu/repos/iuc/ivar_removereads/ivar_removereads/1.3.1+galaxy0 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/ivar_removereads/ivar_removereads/1.2.2+galaxy1 |
toolshed.g2.bx.psu.edu/repos/iuc/ivar_removereads/ivar_removereads/1.2.2+galaxy0 |
toolshed.g2.bx.psu.edu/repos/iuc/ivar_removereads/ivar_removereads/1.2.1+galaxy0 |
toolshed.g2.bx.psu.edu/repos/iuc/ivar_removereads/ivar_removereads/1.2+galaxy0 |
toolshed.g2.bx.psu.edu/repos/iuc/ivar_removereads/ivar_removereads/1.0.1+galaxy0 |
ivar_removereads |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
ivar | 1.3.1 | package |
python | 3.8.1 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
input_bam: zika/Z52_a.trimmed.sorted.bam variants_tsv: zika/primers_Z52_consensus.tsv input_bed: zika/db/zika_primers_consensus.bed amplicon_info: zika/db/pair_information.tsv |
name: value |
zika/Z52_a.trimmed.sorted.bam zika/primers_Z52_consensus.tsv zika/db/zika_primers_consensus.bed zika/db/pair_information.tsv value |