| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/brad-chapman/bam_to_bigwig/bam_to_bigwig/0.2.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/brad-chapman/bam_to_bigwig/bam_to_bigwig/0.1.1 |
| toolshed.g2.bx.psu.edu/repos/brad-chapman/bam_to_bigwig/bam_to_bigwig/0.1.0 |
| toolshed.g2.bx.psu.edu/repos/brad-chapman/bam_to_bigwig/bam_to_bigwig/0.0.2 |
| toolshed.g2.bx.psu.edu/repos/brad-chapman/bam_to_bigwig/bam_to_bigwig/0.0.1 |
| bam_to_bigwig |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| pysam | 0.8.3 | package |
| bedtools | 2.24 | package |
| ucsc_tools | 312 | package |
| Additional information about this tool |
bam_to_bigwig.py $align --outfile=$out --split
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
align: bam_to_bigwig_test.bam |
out: bam_to_bigwig_test.bigwig |
bam_to_bigwig_test.bam bam_to_bigwig_test.bigwig |