Repository revision
11:74a8bef53a00

Repository 'text_processing'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/text_processing

Search in textfiles tool metadata
Miscellaneous
(grep)
tp_grep_tool
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_grep_tool/1.1.1
1.1.1
grep --version | head -n 1
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_grep_tool/9.3+galaxy0
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_grep_tool/1.1.1 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_grep_tool/1.0.0
tp_grep_tool
Requirements (dependencies defined in the <requirements> tag set)
name version type
grep 2.14 package
sed 4.4 package
Functional tests
name inputs outputs required files
Test-1 lines_before: 1
regex_type: -P
color: NOCOLOR
invert:
case_sensitive:
url_paste: AA.{2}GT
lines_after: 0
infile: grep1.txt
output: grep_results1.txt
grep1.txt
grep_results1.txt
Test-2 lines_before: 0
regex_type: -P
color: COLOR
invert:
case_sensitive:
url_paste: AA.{2}GT
lines_after: 0
infile: grep1.txt
output: grep_results2.html
grep1.txt
grep_results2.html
Test-3 lines_before: 0
regex_type: -E
color: NOCOLOR
invert:
case_sensitive:
url_paste: [^ ]+
lines_after: 0
infile: egrep1.txt
output: egrep_results1.txt
egrep1.txt
egrep_results1.txt
Test-4 lines_before: 0
regex_type: -G
color: NOCOLOR
invert:
case_sensitive:
url_paste: [^ ]+
lines_after: 0
infile: egrep1.txt
output: egrep_results2.txt
egrep1.txt
egrep_results2.txt