Repository revision
6:8267b6ad0b45

Repository 'hmmer_phmmer'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/hmmer_phmmer

phmmer tool metadata
Miscellaneous
phmmer
search a protein sequence against a protein database (BLASTP-like)
hmmer_phmmer
toolshed.g2.bx.psu.edu/repos/iuc/hmmer_phmmer/hmmer_phmmer/3.3+galaxy1
3.3+galaxy1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/hmmer_phmmer/hmmer_phmmer/3.3.2+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hmmer_phmmer/hmmer_phmmer/3.3+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/hmmer_phmmer/hmmer_phmmer/3.3
toolshed.g2.bx.psu.edu/repos/iuc/hmmer_phmmer/hmmer_phmmer/3.2
toolshed.g2.bx.psu.edu/repos/iuc/hmmer_phmmer/hmmer_phmmer/3.1b2
toolshed.g2.bx.psu.edu/repos/iuc/hmmer_phmmer/hmmer_phmmer/0.1.0
hmmer_phmmer
Requirements (dependencies defined in the <requirements> tag set)
name version type
hmmer 3.3 package
Functional tests
name inputs outputs required files
Test-1 seqfile: globins45.fa
seqdb: uniprot_matches.fasta
notextw: True
seed: 4
name: value
name: value
name: value
name: value
globins45.fa
uniprot_matches.fasta
value
Test-2 seqfile: globins45.fa
seqdb: uniprot_matches.fasta
oformat:
notextw: True
seed: 4
name: value
globins45.fa
uniprot_matches.fasta
value