| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/gandres/readseq/sniplay_readseq/1.0.3 (this tool) |
| toolshed.g2.bx.psu.edu/repos/gandres/readseq/sniplay_readseq/1.0.2 |
| sniplay_readseq |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| perl | not provided | binary |
| readseq.jar | 10.03.13 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
filein: readseq-alignment.fa format: 1 |
fileout: readseq-standford |
readseq-alignment.fa readseq-standford |
| Test-2 |
filein: readseq-alignment.fa format: 2 |
fileout: readseq-GenBank |
readseq-alignment.fa readseq-GenBank |
| Test-3 |
filein: readseq-alignment.fa format: 3 |
fileout: readseq-NBRF |
readseq-alignment.fa readseq-NBRF |
| Test-4 |
filein: readseq-alignment.fa format: 4 |
fileout: readseq-EMBL |
readseq-alignment.fa readseq-EMBL |
| Test-5 |
filein: readseq-alignment.fa format: 5 |
readseq-alignment.fa |
|
| Test-6 |
filein: readseq-alignment.fa format: 6 |
fileout: readseq-DNAStrider |
readseq-alignment.fa readseq-DNAStrider |
| Test-7 |
filein: readseq-alignment.fa format: 8 |
fileout: readseq-Pearson |
readseq-alignment.fa readseq-Pearson |
| Test-8 |
filein: readseq-alignment.fa format: 11 |
fileout: readseq-phylip32 |
readseq-alignment.fa readseq-phylip32 |
| Test-9 |
filein: readseq-alignment.fa format: 12 |
fileout: readseq-phylip |
readseq-alignment.fa readseq-phylip |
| Test-10 |
filein: readseq-alignment.fa format: 13 |
fileout: readseq-raw |
readseq-alignment.fa readseq-raw |
| Test-11 |
filein: readseq-alignment.fa format: 14 |
fileout: readseq-PIR |
readseq-alignment.fa readseq-PIR |
| Test-12 |
filein: readseq-alignment.fa format: 15 |
fileout: readseq-MSF.txt |
readseq-alignment.fa readseq-MSF.txt |
| Test-13 |
filein: readseq-alignment.fa format: 17 |
fileout: readseq-NEXUS |
readseq-alignment.fa readseq-NEXUS |
| Test-14 |
filein: readseq-alignment.fa format: 18 |
fileout: readseq-Pretty |
readseq-alignment.fa readseq-Pretty |
| Test-15 |
filein: readseq-alignment.fa format: 19 |
fileout: readseq-XML |
readseq-alignment.fa readseq-XML |
| Test-16 |
filein: readseq-alignment.fa format: 22 |
fileout: readseq-Clustal |
readseq-alignment.fa readseq-Clustal |
| Test-17 |
filein: readseq-alignment.fa format: 25 |
fileout: readseq-ACEDB |
readseq-alignment.fa readseq-ACEDB |