Repository revision
1:c784170f3b5e

Repository 'flair_correct'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/flair_correct

FLAIR correct tool metadata
Miscellaneous
corrects misaligned splice sites using genome annotations
flair_correct
toolshed.g2.bx.psu.edu/repos/iuc/flair_correct/flair_correct/1.5+galaxy0
1.5+galaxy0
flair.py --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/flair_correct/flair_correct/1.5+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/flair_correct/flair_correct/1.5
flair_correct
Requirements (dependencies defined in the <requirements> tag set)
name version type
flair 1.5 package
Functional tests
name inputs outputs required files
Test-1 input_query: chrM.bed12
reference_source_genome|reffile: chrM.fa
reference_source_genome|ref_selector_genome: history
input_gtf: UCSC_Main_on_Human_knownGene_region_chrM.gtf
name: value
name: value
chrM.bed12
chrM.fa
UCSC_Main_on_Human_knownGene_region_chrM.gtf
value
Test-2 input_query: chrM.bed12
reference_source_genome|reffile: chrM
reference_source_genome|ref_selector_genome: cached
input_gtf: UCSC_Main_on_Human_knownGene_region_chrM.gtf
name: value
name: value
chrM.bed12
UCSC_Main_on_Human_knownGene_region_chrM.gtf
value