Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/gga/apollo_feat_from_gff3/feat_from_gff3/4.2.13+galaxy0 (this tool) |
toolshed.g2.bx.psu.edu/repos/gga/apollo_feat_from_gff3/feat_from_gff3/4.2.13 |
toolshed.g2.bx.psu.edu/repos/gga/apollo_feat_from_gff3/feat_from_gff3/4.2.5 |
toolshed.g2.bx.psu.edu/repos/gga/apollo_feat_from_gff3/feat_from_gff3/4.2.3 |
toolshed.g2.bx.psu.edu/repos/gga/apollo_feat_from_gff3/feat_from_gff3/4.2.1 |
toolshed.g2.bx.psu.edu/repos/gga/apollo_feat_from_gff3/feat_from_gff3/4.1 |
toolshed.g2.bx.psu.edu/repos/gga/apollo_feat_from_gff3/feat_from_gff3/4.0.0 |
toolshed.g2.bx.psu.edu/repos/gga/apollo_feat_from_gff3/feat_from_gff3/1.0 |
toolshed.g2.bx.psu.edu/repos/gga/apollo_feat_from_gff3/feat_from_gff3/0.9 |
feat_from_gff3 |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
apollo | 4.2.13 | package |
Additional information about this tool |
if [ -z "\$ARROW_GLOBAL_CONFIG_PATH" ]; then echo "__default: local" > '.auth.yml' && echo "local:" >> '.auth.yml' && echo " url: \"\$GALAXY_WEBAPOLLO_URL\"" >> '.auth.yml' && echo " username: \"\$GALAXY_WEBAPOLLO_USER\"" >> '.auth.yml' && echo " password: \"\$GALAXY_WEBAPOLLO_PASSWORD\"" >> '.auth.yml' && export ARROW_GLOBAL_CONFIG_PATH='.auth.yml' ; fi && python '$__tool_directory__/create_features_from_gff3.py' #if $org_source.source_select == "auto_json": --org_json '${org_source.org_file}' #elif $org_source.source_select == "select": --org_id '${org_source.org_select}' #else: --org_raw '${org_source.org_raw}' #end if '$__user_email__' '$gff3_data' --source '${__app__.config.galaxy_infrastructure_url}/history/view/${__app__.security.encode_id($gff3_data.history_id)}' $use_name $disable_cds_recalculation > '$output'
Functional tests |
name | inputs | outputs | required files |
Test-1 |
org_source|org_raw: test_organism org_source|source_select: direct gff3_data: merlin.gff |
name: value |
merlin.gff value |