Repository revision
15:1cab73e6bf13

Repository 'apollo_list_organism'
hg clone https://toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism

List Organisms tool metadata
Miscellaneous
in Apollo
list_organism
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/4.2.13
4.2.13
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/4.2.13+galaxy0
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/4.2.13 (this tool)
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/4.2.5
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/4.2.3
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/4.2.1
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/4.1
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/4.0.0
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/3.1
toolshed.g2.bx.psu.edu/repos/gga/apollo_list_organism/list_organism/3.0
list_organism
Requirements (dependencies defined in the <requirements> tag set)
name version type
apollo 4.2.13 package
Additional information about this tool
if [ -z "\$ARROW_GLOBAL_CONFIG_PATH" ]; then
        echo "__default: local" > '.auth.yml' &&
        echo "local:" >> '.auth.yml' &&
        echo "    url: \"\$GALAXY_WEBAPOLLO_URL\"" >> '.auth.yml' &&
        echo "    username: \"\$GALAXY_WEBAPOLLO_USER\"" >> '.auth.yml' &&
        echo "    password: \"\$GALAXY_WEBAPOLLO_PASSWORD\"" >> '.auth.yml' &&

        export ARROW_GLOBAL_CONFIG_PATH='.auth.yml'
      ; fi &&
  

python '$__tool_directory__/list_organisms.py'
'$__user_email__'
> '$output'
None
False
Functional tests
name inputs outputs required files
Test-1 name: value
value