| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_stacking_ensemble_models/sklearn_stacking_ensemble_models/1.0.8.4 (this tool) |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_stacking_ensemble_models/sklearn_stacking_ensemble_models/1.0.8.3 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_stacking_ensemble_models/sklearn_stacking_ensemble_models/1.0.8.2 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_stacking_ensemble_models/sklearn_stacking_ensemble_models/1.0.8.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_stacking_ensemble_models/sklearn_stacking_ensemble_models/0.2.0.1 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_stacking_ensemble_models/sklearn_stacking_ensemble_models/0.2.0 |
| toolshed.g2.bx.psu.edu/repos/bgruening/sklearn_stacking_ensemble_models/sklearn_stacking_ensemble_models/0.1.0 |
| sklearn_stacking_ensemble_models |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| Galaxy-ML | 0.8.3 | package |
| Additional information about this tool |
#for $i, $base in enumerate($base_est_builder)
#if $i == 0
#if $base.estimator_selector.selected_module == 'custom_estimator'
bases='${base.estimator_selector.c_estimator}';
#else
bases='None';
#end if
#elif $base.estimator_selector.selected_module == 'custom_estimator'
bases="\$bases,${base.estimator_selector.c_estimator}";
#else
bases="\$bases,None";
#end if
#end for
python '$__tool_directory__/stacking_ensembles.py'
--inputs '$inputs'
--outfile '$outfile'
--bases "\$bases"
#if $algo_selection.estimator_type not in ('sklearn.ensemble_VotingClassifier', 'sklearn.ensemble_VotingRegressor')
#if $algo_selection.meta_estimator.estimator_selector.selected_module == 'custom_estimator'
--meta '${algo_selection.meta_estimator.estimator_selector.c_estimator}'
#end if
#end if
#if $get_params
--outfile_params '$outfile_params'
#end if
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
algo_selection|options|weights: [1, 2] algo_selection|estimator_type: sklearn.ensemble_VotingClassifier base_est_builder_0|estimator_selector|selected_estimator: SVC base_est_builder_0|estimator_selector|selected_module: svm base_est_builder_1|estimator_selector|selected_estimator: XGBClassifier base_est_builder_1|estimator_selector|selected_module: xgboost get_params: False |
name: value |
value |
| Test-2 |
algo_selection|meta_estimator|estimator_selector|c_estimator: LinearRegression01.zip algo_selection|meta_estimator|estimator_selector|selected_module: custom_estimator algo_selection|estimator_type: mlxtend.regressor_StackingCVRegressor base_est_builder_0|estimator_selector|c_estimator: RandomForestRegressor01.zip base_est_builder_0|estimator_selector|selected_module: custom_estimator base_est_builder_1|estimator_selector|c_estimator: XGBRegressor01.zip base_est_builder_1|estimator_selector|selected_module: custom_estimator get_params: False |
name: value |
LinearRegression01.zip RandomForestRegressor01.zip XGBRegressor01.zip value |
| Test-3 |
algo_selection|meta_estimator|estimator_selector|selected_estimator: SVR algo_selection|meta_estimator|estimator_selector|selected_module: svm algo_selection|estimator_type: mlxtend.regressor_StackingRegressor base_est_builder_0|estimator_selector|c_estimator: RandomForestRegressor01.zip base_est_builder_0|estimator_selector|selected_module: custom_estimator base_est_builder_1|estimator_selector|selected_estimator: XGBRegressor base_est_builder_1|estimator_selector|selected_module: xgboost get_params: False |
name: value |
RandomForestRegressor01.zip value |