| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/humann_rename_table/humann_rename_table/3.0.0+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/humann_rename_table/humann_rename_table/3.0.0+galaxy0 (this tool) |
| humann_rename_table |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| humann | 3.0.0 | package |
| Additional information about this tool |
humann_rename_table
--input '$input'
-o '$output'
#if $renaming.type == 'standard'
--names '$renaming.names'
#else if $renaming.type == 'advanced'
--custom '$renaming.names.fields.path'
#else
--custom '$renaming.custom'
#end if
$simplify
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: regrouped_gene_families_to_infogo1000.tsv renaming|names: infogo1000 renaming|type: standard simplify: False |
name: value |
regrouped_gene_families_to_infogo1000.tsv value |
| Test-2 |
input: demo_genefamilies.tsv renaming|names: utility_mapping-full-map_uniref90_name-3.0.0-29042021 renaming|type: advanced simplify: False |
name: value |
demo_genefamilies.tsv value |
| Test-3 |
input: demo_genefamilies.tsv renaming|custom: test-db/utility_mapping/map_uniref90_name.txt renaming|type: custom simplify: False |
name: value |
demo_genefamilies.tsv test-db/utility_mapping/map_uniref90_name.txt value |