Repository revision
28:378ddb410225

Repository 'xcms_xcmsset'
hg clone https://toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset

xcms findChromPeaks (xcmsSet) tool metadata
Miscellaneous
xcms findChromPeaks (xcmsSet)
Chromatographic peak detection
abims_xcms_xcmsSet
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/3.4.4.1
3.4.4.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/3.4.4.2
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/3.4.4.1 (this tool)
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/3.4.4.0
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/3.4.3.0
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/3.0.0.0
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.1.1
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.1.0
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.0.11
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.0.9
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.0.8
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.0.7
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_xcmsset/abims_xcms_xcmsSet/2.0.2
abims_xcms_xcmsSet
Requirements (dependencies defined in the <requirements> tag set)
name version type
bioconductor-xcms 3.4.4 package
r-batch 1.1_4 package
r-rcolorbrewer 1.1_2 package
unzip 6.0 package
Functional tests
name inputs outputs required files
Test-1 file_load_section|file_load_conditional|input: ko15.CDF
image: ko15-raw.RData
file_load_section|file_load_conditional|file_load_select: yes
methods|ppm: 25
methods|peakwidth: 20,50
methods|method: CentWave
 ko15-raw.RData
ko15.CDF