Repository revision
4:a1842dbe01cd

Repository 'seurat_find_markers'
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_find_markers

Seurat FindMarkers tool metadata
Miscellaneous
find markers (differentially expressed genes)
seurat_find_markers
toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_find_markers/seurat_find_markers/3.1.2+galaxy0
3.1.2+galaxy0
echo $(R --version | grep version | grep -v GNU)", seurat version" $(R --vanilla --slave -e "library(seurat); cat(sessionInfo()\$otherPkgs\$seurat\$Version)" 2> /dev/null | grep -v -i "WARNING: ")
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_find_markers/seurat_find_markers/3.2.3+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_find_markers/seurat_find_markers/3.1.2+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_find_markers/seurat_find_markers/3.1.1+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_find_markers/seurat_find_markers/3.1.1_0.0.6+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/seurat_find_markers/seurat_find_markers/2.3.1+galaxy1
seurat_find_markers
Requirements (dependencies defined in the <requirements> tag set)
name version type
seurat-scripts 0.0.8 package
Functional tests
name inputs outputs required files
Test-1 input|rds_seurat_file: cluster_seurat.rds
name: value
cluster_seurat.rds
value