Repository revision
3:ef2dc754709c

Repository 'monocle3_plotcells'
hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/monocle3_plotcells

Monocle3 plotCells tool metadata
Miscellaneous
in the reduced dimensionality space
monocle3_plotCells
toolshed.g2.bx.psu.edu/repos/ebi-gxa/monocle3_plotcells/monocle3_plotCells/0.1.4+galaxy0
0.1.4+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/monocle3_plotcells/monocle3_plotCells/0.1.5+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/monocle3_plotcells/monocle3_plotCells/0.1.4+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/ebi-gxa/monocle3_plotcells/monocle3_plotCells/0.1.3+galaxy0
toolshed.g2.bx.psu.edu/repos/ebi-gxa/monocle3_plotcells/monocle3_plotCells/0.1.2+galaxy0
monocle3_plotCells
Requirements (dependencies defined in the <requirements> tag set)
name version type
monocle3-cli 0.0.7 package
Functional tests
name inputs outputs required files
Test-1 cell_size: 1.5
ydim: 2
input_object_format: cds3
norm_method: log
xdim: 1
color_cells_by: pseudotime
alpha: 1
reduction_method: UMAP
input_object_file: input.RDS
attributes: name
input.RDS
name