Repository revision
7:71c78e0eea52

Repository 'bcftools_plugin_counts'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_counts

bcftools counts tool metadata
Miscellaneous
plugin counts number of samples, SNPs, INDELs, MNPs and total sites
bcftools_plugin_counts
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_counts/bcftools_plugin_counts/1.9
1.9
bcftools 2>&1 | grep 'Version:'
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_counts/bcftools_plugin_counts/1.9+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_counts/bcftools_plugin_counts/1.9 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_counts/bcftools_plugin_counts/1.4.0
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_counts/bcftools_plugin_counts/1.3.1
toolshed.g2.bx.psu.edu/repos/iuc/bcftools_plugin_counts/bcftools_plugin_counts/1.3.0
bcftools_plugin_counts
Requirements (dependencies defined in the <requirements> tag set)
name version type
bcftools 1.9 package
htslib 1.9 package
Functional tests
name inputs outputs required files
Test-1 input_file: view.vcf
name: value
view.vcf
value