Repository revision
12:947c2eacccb8

Repository 'ml_visualization_ex'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/ml_visualization_ex

Machine Learning Visualization Extension tool metadata
Miscellaneous
includes several types of plotting for machine learning
ml_visualization_ex
toolshed.g2.bx.psu.edu/repos/bgruening/ml_visualization_ex/ml_visualization_ex/1.0.8.3
1.0.8.3
echo "1.0.8.3"
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/ml_visualization_ex/ml_visualization_ex/1.0.8.4
toolshed.g2.bx.psu.edu/repos/bgruening/ml_visualization_ex/ml_visualization_ex/1.0.8.3 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/ml_visualization_ex/ml_visualization_ex/1.0.8.2
toolshed.g2.bx.psu.edu/repos/bgruening/ml_visualization_ex/ml_visualization_ex/1.0.8.1
toolshed.g2.bx.psu.edu/repos/bgruening/ml_visualization_ex/ml_visualization_ex/1.0.7.12
ml_visualization_ex
Requirements (dependencies defined in the <requirements> tag set)
name version type
Galaxy-ML 0.8.3 package
Functional tests
name inputs outputs required files
Test-1 plotting_selection|infile1: y_true.tabular
plotting_selection|infile2: y_score.tabular
plotting_selection|plot_type: roc_curve
name: value
y_true.tabular
y_score.tabular
value
Test-2 plotting_selection|infile_estimator: best_estimator_.zip
plotting_selection|infile1: regression_X.tabular
plotting_selection|column_selector_options|selected_column_selector_option: all_columns
plotting_selection|plot_type: feature_importances
name: value
best_estimator_.zip
regression_X.tabular
value
Test-3 plotting_selection|infile1: mv_result03.tabular
plotting_selection|plot_type: learning_curve
name: value
mv_result03.tabular
value
Test-4 plotting_selection|infile1: y_true.tabular
plotting_selection|infile2: y_score.tabular
plotting_selection|plot_type: pr_curve
name: value
y_true.tabular
y_score.tabular
value
Test-5 plotting_selection|infile1: grid_scores_.tabular
plotting_selection|plot_type: rfecv_gridscores
name: value
grid_scores_.tabular
value
Test-6 plotting_selection|infile_model_config: deepsear_1feature.json
plotting_selection|plot_type: keras_plot_model
name: value
deepsear_1feature.json
value
Test-7 plotting_selection|infile_true: ml_confusion_true.tabular
plotting_selection|header_true: False
plotting_selection|column_selector_options_true|selected_column_selector_option: all_columns
plotting_selection|infile_predicted: ml_confusion_predicted.tabular
plotting_selection|header_predicted: False
plotting_selection|title: Confusion matrix
plotting_selection|plot_color: winter
plotting_selection|plot_type: classification_confusion_matrix
name: value
ml_confusion_true.tabular
ml_confusion_predicted.tabular
value
Test-8 plotting_selection|infile_true: true_header.tabular
plotting_selection|header_true: True
plotting_selection|column_selector_options_true|selected_column_selector_option: all_columns
plotting_selection|infile_predicted: predicted_header.tabular
plotting_selection|header_predicted: True
plotting_selection|title: Confusion matrix
plotting_selection|plot_color: winter
plotting_selection|plot_type: classification_confusion_matrix
name: value
true_header.tabular
predicted_header.tabular
value