Repository revision
7:57a2424d0893

Repository 'qiime_multiple_join_paired_ends'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/qiime_multiple_join_paired_ends

Run join_paired_ends on multiple files tool metadata
Miscellaneous
(multiple_join_paired_ends)
qiime_multiple_join_paired_ends
toolshed.g2.bx.psu.edu/repos/iuc/qiime_multiple_join_paired_ends/qiime_multiple_join_paired_ends/1.9.1.0
1.9.1.0
multiple_join_paired_ends.py -v
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/qiime_multiple_join_paired_ends/qiime_multiple_join_paired_ends/1.9.1.0 (this tool)
qiime_multiple_join_paired_ends
Requirements (dependencies defined in the <requirements> tag set)
name version type
qiime 1.9.1 package
fastq-join 1.3.1 package
Functional tests
name inputs outputs required files
Test-1 leading_text:
input_files_0|r2_file: multiple_join_paired_ends/without_barcode/reverse_1.fastq
input_files_0|r1_file: multiple_join_paired_ends/without_barcode/forward_1.fastq
input_files_1|r1_file: multiple_join_paired_ends/without_barcode/forward_2.fastq
input_files_0|barcode|match_barcodes: no
trailing_text:
input_files_1|r2_file: multiple_join_paired_ends/without_barcode/reverse_2.fastq
input_files_1|barcode|match_barcodes: no
multiple_join_paired_ends/without_barcode/forward_1.fastq
multiple_join_paired_ends/without_barcode/reverse_1.fastq
multiple_join_paired_ends/without_barcode/forward_2.fastq
multiple_join_paired_ends/without_barcode/reverse_2.fastq
Test-2 input_files_0|barcode|barcode_seq: multiple_join_paired_ends/with_barcode/barcode_1.fastq
leading_text:
input_files_0|r2_file: multiple_join_paired_ends/with_barcode/reverse_1.fastq
input_files_0|r1_file: multiple_join_paired_ends/with_barcode/forward_1.fastq
input_files_1|r1_file: multiple_join_paired_ends/with_barcode/forward_2.fastq
input_files_0|barcode|match_barcodes: yes
trailing_text:
input_files_1|r2_file: multiple_join_paired_ends/with_barcode/reverse_2.fastq
input_files_1|barcode|barcode_seq: multiple_join_paired_ends/with_barcode/barcode_2.fastq
input_files_1|barcode|match_barcodes: yes
multiple_join_paired_ends/with_barcode/forward_1.fastq
multiple_join_paired_ends/with_barcode/reverse_1.fastq
multiple_join_paired_ends/with_barcode/barcode_1.fastq
multiple_join_paired_ends/with_barcode/forward_2.fastq
multiple_join_paired_ends/with_barcode/reverse_2.fastq
multiple_join_paired_ends/with_barcode/barcode_2.fastq