Repository revision
0:f28678233baf

Repository 'graphembed'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/graphembed

GraphEmbed tool metadata
Miscellaneous
GraphEmbed
Compute and plot a 2D embedding of a data matrix given supervised class information
graphembed
toolshed.g2.bx.psu.edu/repos/iuc/graphembed/graphembed/2.4.0
2.4.0
graphembed --version | cut -d'v' -f 2
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/graphembed/graphembed/2.4.0 (this tool)
graphembed
Requirements (dependencies defined in the <requirements> tag set)
name version type
graph_embed 2.4 package
Functional tests
name inputs outputs required files
Test-1 i: prot_expression.mini.tsv
t: target.tsv
attributes: name
attributes: name
prot_expression.mini.tsv
target.tsv
name
Test-2 showlog: False
advanced|normalization: True
advanced|random_state: 2
i: prot_expression.mini.tsv
k: 5
class_confidence: 1.5
l: 0
advanced|correlation_transformation: True
advanced|feature_selection: True
t: target.tsv
advanced|option: yes
z: 10
attributes: name
attributes: name
prot_expression.mini.tsv
target.tsv
name