| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/devteam/macs/peakcalling_macs/1.0.1 (this tool) |
| peakcalling_macs |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| macs | 1.3.7.1 | package |
| R | 2.15.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_type|input_type_selector: single_end gsize: 2.7e+9 tsize: 36 input_type|input_control_file1: chipseq_input.bed.gz diag_type|diag_type_selector: no_diag pvalue: 1e-5 nolambda: False experiment_name: Galaxy Test Run bw: 300 input_type|input_chipseq_file1: chipseq_enriched.bed.gz xls_to_interval: False nomodel_type|nomodel_type_selector: create_model mfold: 13 lambdaset: 1000,5000,10000 wig_type|wig_type_selector: no_wig futurefdr: False |
attributes: name attributes: name |
chipseq_enriched.bed.gz chipseq_input.bed.gz name |
| Test-2 |
input_type|input_type_selector: single_end gsize: 2.7e+9 tsize: 36 input_type|input_control_file1: chipseq_input.bed.gz diag_type|diag_type_selector: no_diag pvalue: 1e-5 nolambda: False experiment_name: Galaxy Test Run bw: 300 input_type|input_chipseq_file1: chipseq_enriched.bed.gz xls_to_interval: True nomodel_type|nomodel_type_selector: create_model mfold: 13 lambdaset: 1000,5000,10000 wig_type|wig_type_selector: no_wig futurefdr: False |
attributes: name attributes: name attributes: name attributes: name |
chipseq_enriched.bed.gz chipseq_input.bed.gz name |