Repository revision
5:b9d7410b6593

Repository 'hicexplorer_hicnormalize'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicnormalize

hicNormalize tool metadata
Miscellaneous
hicNormalize
normalizes a matrix to norm range or smallest read count
hicexplorer_hicnormalize
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicnormalize/hicexplorer_hicnormalize/3.4.3.0
3.4.3.0
hicNormalize --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicnormalize/hicexplorer_hicnormalize/3.6+galaxy0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicnormalize/hicexplorer_hicnormalize/3.4.3.0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicnormalize/hicexplorer_hicnormalize/3.4.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicnormalize/hicexplorer_hicnormalize/3.4.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicnormalize/hicexplorer_hicnormalize/3.3.1.0
hicexplorer_hicnormalize
Requirements (dependencies defined in the <requirements> tag set)
name version type
hicexplorer 3.4.3 package
Functional tests
name inputs outputs required files
Test-1 matrix_h5_cooler_multiple: small_test_matrix.cool
normalize_conditional|normalize: norm_range
name: value
small_test_matrix.cool
value
Test-2 matrix_h5_cooler_multiple: ['small_test_matrix.cool', 'small_test_matrix.cool']
normalize_conditional|normalize: smallest
name: value
small_test_matrix.cool
value
Test-3 matrix_h5_cooler_multiple: ['small_test_matrix.h5', 'small_test_matrix.h5']
normalize_conditional|normalize: smallest
name: value
small_test_matrix.h5
value