Repository revision
9:db038368c4c7

Repository 'openms_lowmempeakpickerhires'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/openms_lowmempeakpickerhires

LowMemPeakPickerHiRes tool metadata
Miscellaneous
Finds mass spectrometric peaks in profile mass spectra.
LowMemPeakPickerHiRes
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_lowmempeakpickerhires/LowMemPeakPickerHiRes/2.5+galaxy0
2.5+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_lowmempeakpickerhires/LowMemPeakPickerHiRes/2.5+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_lowmempeakpickerhires/LowMemPeakPickerHiRes/2.3.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_lowmempeakpickerhires/LowMemPeakPickerHiRes/2.2.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_lowmempeakpickerhires/LowMemPeakPickerHiRes/2.1.0
LowMemPeakPickerHiRes
Requirements (dependencies defined in the <requirements> tag set)
name version type
openms 2.5 package
openms-thirdparty 2.5 package
blast 2.9.0 package
openjdk 8.0.192 package
ctdopts 1.4 package
Functional tests
name inputs outputs required files
Test-1 in: PeakPickerHiRes_input.mzML
algorithm|signal_to_noise: 1.0
algorithm|spacing_difference_gap: 4.0
algorithm|spacing_difference: 1.5
algorithm|missing: 1
algorithm|ms_levels: 1
algorithm|report_FWHM: False
algorithm|report_FWHM_unit: relative
algorithm|SignalToNoise|max_intensity: -1
algorithm|SignalToNoise|auto_max_stdev_factor: 3.0
algorithm|SignalToNoise|auto_max_percentile: 95
algorithm|SignalToNoise|auto_mode: 0
algorithm|SignalToNoise|win_len: 200.0
algorithm|SignalToNoise|bin_count: 30
algorithm|SignalToNoise|min_required_elements: 10
algorithm|SignalToNoise|noise_for_empty_window: 1e+20
algorithm|SignalToNoise|write_log_messages: True
adv_opts_cond|force: False
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
OPTIONAL_OUTPUTS: ctd_out_FLAG
name: value
name: value
PeakPickerHiRes_input.mzML
value