| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_annotate/gemini_annotate/0.20.1+galaxy2 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_annotate/gemini_annotate/0.20.1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_annotate/gemini_annotate/0.20.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_annotate/gemini_annotate/0.18.1.2 |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_annotate/gemini_annotate/0.18.1.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/gemini_annotate/gemini_annotate/0.18.1.0 |
| gemini_annotate |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| gemini | 0.20.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
infile: gemini_load_result1.db annotate_source: anno.bed region_only: False a|column_name: anno5 a|a_selector: count |
name: value |
gemini_load_result1.db anno.bed value |
| Test-2 |
infile: gemini_load_result1.db annotate_source: gemini_amend.vcf region_only: False a|column_name: anno5 a|a_selector: count |
name: value |
gemini_load_result1.db gemini_amend.vcf value |
| Test-3 |
infile: gemini_load_result1.db annotate_source: gemini_amend.vcf.gz region_only: False a|column_name: anno5 a|a_selector: count |
name: value |
gemini_load_result1.db gemini_amend.vcf.gz value |
| Test-4 |
infile: gemini_load_result1.db annotate_source: anno.bed a|actions_0|element_to_extract: 1 a|actions_0|column_name: anno5 a|actions_0|column_type: text a|actions_0|operation: first a|a_selector: extract |
gemini_load_result1.db anno.bed |
|
| Test-5 |
infile: gemini_load_result1.db annotate_source: anno.bed a|actions_0|element_to_extract: 1 a|actions_0|column_name: anno5 a|actions_0|column_type: text a|actions_0|operation: first a|actions_1|element_to_extract: 2 a|actions_1|column_name: anno6 a|actions_1|column_type: integer a|actions_1|operation: first a|a_selector: extract |
gemini_load_result1.db anno.bed |