| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/vg_deconstruct/vg_deconstruct/1.23.0+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/vg_deconstruct/vg_deconstruct/1.23.0 |
| vg_deconstruct |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| vg | 1.23.0 | package |
| Additional information about this tool |
ln -s '$infile' ./infile.${infile.ext} &&
vg deconstruct
#if $path:
--path '${','.join([$p for $p in $path])}'
#end if
#if $path_prefix
--path-prefix '${','.join([$p for $p in $path_prefix])}'
#end if
#if $alt_prefix
--alt-prefix '${','.join([$p for $p in $alt_prefix])}'
#end if
#if $snarls:
--snarls '$snarls'
#end if
$path_traversals ## -e
--threads=\${GALAXY_SLOTS:-1}
./infile.${infile.ext}
> '$output'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
infile: hla.xg path: gi|568815592:29791752-29792749 path_traversals: True |
name: value |
hla.xg value |