Repository revision
10:57c6718cbfcc

Repository 'funannotate_compare'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare

Funannotate compare tool metadata
Miscellaneous
annotations
funannotate_compare
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.15+galaxy4
1.8.15+galaxy4
funannotate check --show-versions
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.17+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.15+galaxy4 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.15+galaxy3
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.15+galaxy2
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.15+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.15+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.9+galaxy3
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.9+galaxy2
toolshed.g2.bx.psu.edu/repos/iuc/funannotate_compare/funannotate_compare/1.8.9+galaxy1
funannotate_compare
Requirements (dependencies defined in the <requirements> tag set)
name version type
funannotate 1.8.15 package
Functional tests
name inputs outputs required files
Test-1 input: ['compare/Genus_species.gbk', 'compare/Other_species.gbk', 'compare/Other_beast.gbk', 'compare/Yet_another.gbk']
database: 2021-07-20-120000
ml|ml_method: raxml
name: value
compare/Genus_species.gbk
compare/Other_species.gbk
compare/Other_beast.gbk
compare/Yet_another.gbk
value
Test-2 input: ['compare/Genus_species.gbk', 'compare/Other_species.gbk', 'compare/Other_beast.gbk', 'compare/Yet_another.gbk']
database: 2021-07-20-120000
run_dnds: estimate
ml|ml_method: raxml
name: value
compare/Genus_species.gbk
compare/Other_species.gbk
compare/Other_beast.gbk
compare/Yet_another.gbk
value
Test-3 input: ['compare/Genus_species.gbk', 'compare/Other_species.gbk', 'compare/Other_beast.gbk', 'compare/Yet_another.gbk']
database: 2021-07-20-120000
run_dnds: full
ml|ml_method: raxml
name: value
compare/Genus_species.gbk
compare/Other_species.gbk
compare/Other_beast.gbk
compare/Yet_another.gbk
value