| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_merge/samtools_merge/1.15.1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_merge/samtools_merge/1.13 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/samtools_merge/samtools_merge/1.9 |
| samtools_merge |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| samtools | 1.13 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
bamfiles: ['test_input_1_a.sam', 'test_input_1_b.sam', 'test_input_1_c.sam'] |
name: value |
test_input_1_a.sam test_input_1_b.sam test_input_1_c.sam value |
| Test-2 |
bamfiles: ['test_input_1_a.bam', 'test_input_1_b.bam', 'test_input_1_c.bam'] |
name: value |
test_input_1_a.bam test_input_1_b.bam test_input_1_c.bam value |
| Test-3 |
bamfiles: test_input_1_b.bam |
name: value |
test_input_1_b.bam value |
| Test-4 |
bamfiles: ['test_input_1_a.bam', 'test_input_1_b.bam'] idrg: True idpg: True |
name: value |
test_input_1_a.bam test_input_1_b.bam value |
| Test-5 |
bamfiles: ['test_input_1_a_regex.sam', 'test_input_1_b_regex.sam'] |
name: value |
test_input_1_a_regex.sam test_input_1_b_regex.sam value |
| Test-6 |
bamfiles: ['test_input_1_a.bam', 'test_input_1_b.bam', 'test_input_1_c.bam'] bed_file: test_input_1_a.bed |
name: value |
test_input_1_a.bam test_input_1_b.bam test_input_1_c.bam test_input_1_a.bed value |