| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_gnpsexport/GNPSExport/2.8+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_gnpsexport/GNPSExport/2.6+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_gnpsexport/GNPSExport/2.5+galaxy0 |
| GNPSExport |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.6 | package |
| openms-thirdparty | 2.6 | package |
| blast | 2.9.0 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in_cm: GNPSExport_single.consensusXML in_mzml: GNPSExport_mz1.mzML output_type: full_spectra precursor_mz_tolerance: 0.0001 precursor_rt_tolerance: 5.0 merged_spectra|cos_similarity: 0.95 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
GNPSExport_single.consensusXML GNPSExport_mz1.mzML value |
| Test-2 |
in_cm: GNPSExport_single.consensusXML in_mzml: GNPSExport_mz1.mzML output_type: merged_spectra precursor_mz_tolerance: 0.0001 precursor_rt_tolerance: 5.0 merged_spectra|cos_similarity: 0.95 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
GNPSExport_single.consensusXML GNPSExport_mz1.mzML value |
| Test-3 |
in_cm: GNPSExport_merged.consensusXML in_mzml: ['GNPSExport_mz1.mzML', 'GNPSExport_mz2.mzML'] output_type: full_spectra precursor_mz_tolerance: 0.0001 precursor_rt_tolerance: 5.0 merged_spectra|cos_similarity: 0.95 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
GNPSExport_merged.consensusXML GNPSExport_mz1.mzML GNPSExport_mz2.mzML value |
| Test-4 |
in_cm: GNPSExport_merged.consensusXML in_mzml: ['GNPSExport_mz1.mzML', 'GNPSExport_mz2.mzML'] output_type: full_spectra precursor_mz_tolerance: 0.0001 precursor_rt_tolerance: 5.0 merged_spectra|cos_similarity: 0.95 adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
GNPSExport_merged.consensusXML GNPSExport_mz1.mzML GNPSExport_mz2.mzML value |