| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/modify_loom/modify_loom/0.10.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/modify_loom/modify_loom/0.7.5+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/modify_loom/modify_loom/0.7.5+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/modify_loom/modify_loom/0.7.4+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/modify_loom/modify_loom/0.6.22.post1+galaxy4 |
| toolshed.g2.bx.psu.edu/repos/iuc/modify_loom/modify_loom/0.6.22.post1+galaxy3 |
| toolshed.g2.bx.psu.edu/repos/iuc/modify_loom/modify_loom/0.6.22.post1+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/modify_loom/modify_loom/0.6.22.post1+galaxy1 |
| modify_loom |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| anndata | 0.7.5 | package |
| loompy | 2.0.17 | package |
| Additional information about this tool |
cp '${input}' loom_add_out.loom &&
python '$__tool_directory__/modify_loom.py' -f 'loom_add_out.loom'
#if $which_add.add_type == "cols":
-a cols -c '${which_add.cols}'
#else if $which_add.add_type == "cols":
-a rows -r '${which_add.rows}'
#else if $which_add.add_type == "layers":
-a layers -l '${which_add.layers}'
#end if
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: addtest.loom which_add|cols: cols.tsv which_add|add_type: cols |
name: value |
addtest.loom cols.tsv value |
| Test-2 |
input: addtest.loom which_add|rows: rows.tsv which_add|add_type: rows |
name: value |
addtest.loom rows.tsv value |
| Test-3 |
input: addtest.loom which_add|layers: addlayer1.tsv which_add|add_type: layers |
name: value |
addtest.loom addlayer1.tsv value |