Repository revision
11:3a95a7f42698

Repository 'idpqonvert'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/idpqonvert

idpEmbedder tool metadata
Miscellaneous
idpEmbedder
Embed human/mouse gene metadata into IDPicker files
idpqonvertEmbedder
toolshed.g2.bx.psu.edu/repos/galaxyp/idpqonvert/idpqonvertEmbedder/3.0.20175.1
3.0.20175.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/idpqonvert/idpqonvertEmbedder/3.0.20175.1 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/idpqonvert/idpqonvertEmbedder/3.0.20163.1
toolshed.g2.bx.psu.edu/repos/galaxyp/idpqonvert/idpqonvertEmbedder/3.0.20163.0
toolshed.g2.bx.psu.edu/repos/galaxyp/idpqonvert/idpqonvertEmbedder/3.0.11579.0
toolshed.g2.bx.psu.edu/repos/galaxyp/idpqonvert/idpqonvertEmbedder/3.0.11392.0
toolshed.g2.bx.psu.edu/repos/galaxyp/idpqonvert/idpqonvertEmbedder/3.0.10246.0
idpqonvertEmbedder
Requirements (dependencies defined in the <requirements> tag set)
name version type
bumbershoot 3_0_20175_cbf82d0 package
Functional tests
name inputs outputs required files
Test-1 input: 201208-378803.idpDB
EmbedGeneMetadata: False
attributes: name
201208-378803.idpDB
name
Test-2 input: 201208-378803.idpDB
EmbedGeneMetadata: True
attributes: name
201208-378803.idpDB
name
Test-3 use_raw_data_condition|use_raw_data: True
use_raw_data_condition|EmbedSpectrumSources: False
use_raw_data_condition|quantitation_method_condition|QuantitationMethod: None
input: 201208-378803.idpDB
use_raw_data_condition|input_raw: input/201208-378803.mzML
use_raw_data_condition|EmbedSpectrumScanTimes: True
EmbedGeneMetadata: True
attributes: name
201208-378803.idpDB
input/201208-378803.mzML
name
Test-4 use_raw_data_condition|use_raw_data: True
use_raw_data_condition|EmbedSpectrumSources: True
use_raw_data_condition|quantitation_method_condition|QuantitationMethod: None
input: 201208-378803.idpDB
use_raw_data_condition|input_raw: input/201208-378803.mzML
use_raw_data_condition|EmbedSpectrumScanTimes: False
EmbedGeneMetadata: True
attributes: name
201208-378803.idpDB
input/201208-378803.mzML
name
Test-5 use_raw_data_condition|use_raw_data: True
use_raw_data_condition|input_raw: input/201208-378803.mzML
use_raw_data_condition|quantitation_method_condition|NormalizeReporterIons: True
use_raw_data_condition|quantitation_method_condition|ReporterIonMzTolerance: 10
use_raw_data_condition|EmbedSpectrumSources: False
use_raw_data_condition|quantitation_method_condition|QuantitationMethod: ITRAQ4plex
input: 201208-378803.idpDB
use_raw_data_condition|quantitation_method_condition|ReporterIonMzTolerance_units: ppm
use_raw_data_condition|EmbedSpectrumScanTimes: True
EmbedGeneMetadata: True
attributes: name
201208-378803.idpDB
input/201208-378803.mzML
name