Repository revision
2:99297071f4b5

Repository 'encyclopedia_library_to_blib'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/encyclopedia_library_to_blib

ConvertLibraryToBlib tool metadata
Miscellaneous
Convert EncyclopeDIA Library to BLIB for Skyline
encyclopedia_library_to_blib
toolshed.g2.bx.psu.edu/repos/galaxyp/encyclopedia_library_to_blib/encyclopedia_library_to_blib/1.12.34+galaxy0
1.12.34+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/encyclopedia_library_to_blib/encyclopedia_library_to_blib/1.12.34+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/encyclopedia_library_to_blib/encyclopedia_library_to_blib/1.2.2+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/encyclopedia_library_to_blib/encyclopedia_library_to_blib/0.9.5.0
encyclopedia_library_to_blib
Requirements (dependencies defined in the <requirements> tag set)
name version type
encyclopedia 1.12.34 package
Additional information about this tool
EncyclopeDIA -convert -libtoblib
            -Djava.awt.headless=true -Duser.language=en-US -Duser.region=US
            -Xmx\$[ \${GALAXY_MEMORY_MB:-20480} / 1024 ]g
            -numberOfThreadsUsed "\${GALAXY_SLOTS:-4}"
        -i '$i'
        -o '$output'
        #if $istest == 'yes'
        && sqlite3 -readonly '$output' 'SELECT distinct peptideSeq FROM RefSpectra;' > '$test_output'
        #end if
    
None
False
Functional tests
name inputs outputs required files
Test-1 i: PrositLib.dlib
istest: yes
name: value
PrositLib.dlib
value