| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_myrimatchadapter/MyriMatchAdapter/2.8+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_myrimatchadapter/MyriMatchAdapter/2.6+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_myrimatchadapter/MyriMatchAdapter/2.5+galaxy0 |
| MyriMatchAdapter |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.6 | package |
| openms-thirdparty | 2.6 | package |
| blast | 2.9.0 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: spectra.mzML precursor_mass_tolerance: 5.0 precursor_mass_tolerance_unit: ppm precursor_mass_tolerance_avg: False fragment_mass_tolerance: 0.3 fragment_mass_tolerance_unit: Da database: proteins.fasta fixed_modifications: variable_modifications: Oxidation (M) NumChargeStates: 3 TicCutoffPercentage: 0.98 MaxDynamicMods: 2 MaxResultRank: 5 CleavageRules: MinTerminiCleavages: 2 MaxMissedCleavages: -1 adv_opts_cond|MinPeptideMass: 0.0 adv_opts_cond|MaxPeptideMass: 10000.0 adv_opts_cond|MinPeptideLength: 5 adv_opts_cond|MaxPeptideLength: 75 adv_opts_cond|UseSmartPlusThreeModel: False adv_opts_cond|NumIntensityClasses: 3 adv_opts_cond|ClassSizeMultiplier: 2.0 adv_opts_cond|MonoisotopeAdjustmentSet: [-1,2] adv_opts_cond|SpectrumListFilters: adv_opts_cond|ignoreConfigErrors: False adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
spectra.mzML proteins.fasta value |