| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.8.1+1+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.8.1+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.8.1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.7.2+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.6.0+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.6.0+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.6.0+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.4.3+galaxy10 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.4.3+galaxy9 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.4.3+galaxy8 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.4.3+galaxy6 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.4.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.4.2+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne/scanpy_run_tsne/1.3.2+galaxy1 |
| scanpy_run_tsne |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| scanpy-scripts | 1.1.0 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_obj_file: find_cluster.h5 input_format: anndata output_format: anndata embeddings: True settings|perplexity_file: perplexity.txt settings|random_seed: 0 settings|default: False |
name: value name: value |
find_cluster.h5 perplexity.txt value |
| Test-2 |
input_obj_file: find_cluster.h5 input_format: anndata output_format: anndata embeddings: True settings|perplexity: 30 settings|random_seed: 0 settings|default: False |
name: value name: value |
find_cluster.h5 value |