Repository revision
3:e570599ec9f2

Repository 'openms_pepnovoadapter'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/openms_pepnovoadapter

PepNovoAdapter tool metadata
Miscellaneous
Adapter to PepNovo supporting all PepNovo command line parameters. The results are converted from the PepNovo text outfile format into the idXML format.
PepNovoAdapter
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_pepnovoadapter/PepNovoAdapter/2.6+galaxy0
2.6+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_pepnovoadapter/PepNovoAdapter/2.8+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_pepnovoadapter/PepNovoAdapter/2.6+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_pepnovoadapter/PepNovoAdapter/2.5+galaxy0
PepNovoAdapter
Requirements (dependencies defined in the <requirements> tag set)
name version type
openms 2.6 package
openms-thirdparty 2.6 package
blast 2.9.0 package
ctdopts 1.4 package
Functional tests
name inputs outputs required files
Test-1 in: PepNovo_1.mzML
model: LTQ_COMP
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
name: value
PepNovo_1.mzML
value
Test-2 in: PepNovo_1.mzML
model: LTQ_COMP
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
name: value
PepNovo_1.mzML
value