| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/delly_merge/delly_merge/0.9.1+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/delly_merge/delly_merge/0.9.1+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/delly_merge/delly_merge/0.8.7+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/delly_merge/delly_merge/0.8.5+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/delly_merge/delly_merge/0.8.3+galaxy0 |
| delly_merge |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| delly | 0.9.1 | package |
| bcftools | 1.12 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: ['call_1.bcf.gz', 'call_2.bcf.gz'] oo|out: ['vcf', 'bcf'] |
name: value name: value |
call_1.bcf.gz call_2.bcf.gz value |
| Test-2 |
input: ['call_1.bcf.gz', 'call_2.bcf.gz'] generic|chunks: 500 generic|vaf: 0.16 generic|coverage: 10 generic|minsize: 0 generic|maxsize: 1000000 generic|cnvmode: True generic|precise: True generic|pass: True oo|out: ['vcf', 'bcf', 'log'] |
name: value name: value name: value |
call_1.bcf.gz call_2.bcf.gz value |
| Test-3 |
input: ['call_1.vcf.gz', 'call_2.vcf.gz'] oo|out: ['vcf', 'bcf'] |
name: value name: value |
call_1.vcf.gz call_2.vcf.gz value |