Repository revision
0:7073825e4338

Repository 'snpfinder'
hg clone https://toolshed.g2.bx.psu.edu/repos/chrisd/snpfinder

SNPFinder tool metadata
Miscellaneous
SNPFinder
A simple naive metagenomics variant caller
snpfinder
toolshed.g2.bx.psu.edu/repos/chrisd/snpfinder/snpfinder/0.1.0
0.1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/chrisd/snpfinder/snpfinder/0.1.0 (this tool)
snpfinder
Requirements (dependencies defined in the <requirements> tag set)
name version type
snpfinder 0.1 package
Functional tests
name inputs outputs required files
Test-1 sam_type|samse_input: samse.sam
sam_type|mode: single_end
reference: ref.fa
output: samse_result
ref.fa
samse.sam
samse_result
Test-2 sam_type|mode: paired_end
sam_type|sampe_input: sampe.sam
reference: ref.fa
output: sampe_result
ref.fa
sampe.sam
sampe_result