| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/hca_matrix_downloader/hca_matrix_downloader/v0.0.4+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/hca_matrix_downloader/hca_matrix_downloader/v0.0.3+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/ebi-gxa/hca_matrix_downloader/hca_matrix_downloader/v0.0.2+galaxy0 |
| hca_matrix_downloader |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| hca-matrix-downloader | 0.0.4 | package |
| Additional information about this tool |
hca-matrix-downloader -p '${project}' -o out -f '${matrix_format}'
#if $species:
-s ${species}
#end if
#if $matrix_format == "mtx":
&& hca-mtx-to-10x out.mtx .
&& gunzip -c out.mtx/cells.tsv.gz > exp_design.tsv
#end if
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
project: cddab57b-6868-4be4-806f-395ed9dd635a matrix_format: mtx |
name: value name: value name: value name: value |
value |
| Test-2 |
project: f8aa201c-4ff1-45a4-890e-840d63459ca2 matrix_format: loom species: homo_sapiens |
name: value |
value |