| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/funannotate_annotate/funannotate_annotate/1.8.9+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/funannotate_annotate/funannotate_annotate/1.8.9+galaxy1 (this tool) |
| funannotate_annotate |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| funannotate | 1.8.9 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input|genbank: predict_augustus/Genus_species.gbk input|input_type: gbk database: 2021-07-20-120000 busco_db: insecta outputs: ['gbk', 'annotations', 'contigs_fsa', 'agp', 'tbl', 'sqn', 'scaffolds_fa', 'proteins_fa', 'mrna_transcripts_fa', 'cds_transcripts_fa', 'gff3', 'discrepency', 'stats', 'must_fix', 'need_curating', 'new_names_passed'] |
name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value |
predict_augustus/Genus_species.gbk value |
| Test-2 |
input|gff: predict_augustus/Genus_species.gff3 input|fasta: genome.fa input|species: Genus species input|input_type: gff database: 2021-07-20-120000 busco_db: insecta outputs: ['gbk', 'annotations', 'contigs_fsa', 'agp', 'tbl', 'sqn', 'scaffolds_fa', 'proteins_fa', 'mrna_transcripts_fa', 'cds_transcripts_fa', 'gff3', 'discrepency', 'stats', 'must_fix', 'need_curating', 'new_names_passed'] |
name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value name: value |
predict_augustus/Genus_species.gff3 genome.fa value |