| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_openswathfeaturexmltotsv/OpenSwathFeatureXMLToTSV/2.6+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_openswathfeaturexmltotsv/OpenSwathFeatureXMLToTSV/2.5+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_openswathfeaturexmltotsv/OpenSwathFeatureXMLToTSV/2.3.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_openswathfeaturexmltotsv/OpenSwathFeatureXMLToTSV/2.2.0 |
| toolshed.g2.bx.psu.edu/repos/galaxyp/openms_openswathfeaturexmltotsv/OpenSwathFeatureXMLToTSV/2.1.0 |
| OpenSwathFeatureXMLToTSV |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| openms | 2.5 | package |
| openms-thirdparty | 2.5 | package |
| blast | 2.9.0 | package |
| openjdk | 8.0.192 | package |
| ctdopts | 1.4 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
in: OpenSwathFeatureXMLToTSV_input.featureXML tr: OpenSwathFeatureXMLToTSV_input.TraML short_format: True best_scoring_peptide: adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
OpenSwathFeatureXMLToTSV_input.featureXML OpenSwathFeatureXMLToTSV_input.TraML value |
| Test-2 |
in: OpenSwathFeatureXMLToTSV_input.featureXML tr: OpenSwathFeatureXMLToTSV_input.TraML short_format: False best_scoring_peptide: adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
OpenSwathFeatureXMLToTSV_input.featureXML OpenSwathFeatureXMLToTSV_input.TraML value |
| Test-3 |
in: OpenSwathFeatureXMLToTSV_input.featureXML tr: OpenSwathFeatureXMLToTSV_input.TraML short_format: True best_scoring_peptide: main_var_xx_lda_prelim_score adv_opts_cond|force: False adv_opts_cond|test: true adv_opts_cond|adv_opts_selector: advanced OPTIONAL_OUTPUTS: ctd_out_FLAG |
name: value name: value |
OpenSwathFeatureXMLToTSV_input.featureXML OpenSwathFeatureXMLToTSV_input.TraML value |