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Repository revision

Revision: 6:94b552c6830a

Repository 'hicexplorer_hicmergeloops'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicmergeloops

hicMergeLoops tool metadata

Miscellaneous

Name: hicMergeLoops

Description: merge detected loops of different resolutions.

Id: hicexplorer_hicmergeloops

Guid: toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicmergeloops/hicexplorer_hicmergeloops/3.6+galaxy0

Version: 3.6+galaxy0

Version command string: hicMergeLoops --version

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicmergeloops/hicexplorer_hicmergeloops/3.6+galaxy1

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicmergeloops/hicexplorer_hicmergeloops/3.6+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicmergeloops/hicexplorer_hicmergeloops/3.4.3.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicmergeloops/hicexplorer_hicmergeloops/3.4.2.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicmergeloops/hicexplorer_hicmergeloops/3.4.1.0

toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicmergeloops/hicexplorer_hicmergeloops/3.3.1.0

hicexplorer_hicmergeloops

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

hicexplorer

3.6

package

Functional tests

name

inputs

outputs

required files

Test-1

inputFiles: ['hicMergeLoops/gm12878_10kb.bedgraph', 'hicMergeLoops/gm12878_5kb.bedgraph', 'hicMergeLoops/gm12878_25kb.bedgraph']
lowestResolution: 25000

name: value

hicMergeLoops/gm12878_10kb.bedgraph
hicMergeLoops/gm12878_5kb.bedgraph
hicMergeLoops/gm12878_25kb.bedgraph
value