Repository revision
3:4cd116158aef

Repository 'get_flanks'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/get_flanks

Get flanks tool metadata
Miscellaneous
Get flanks
returns flanking region/s for every gene
get_flanks1
toolshed.g2.bx.psu.edu/repos/devteam/get_flanks/get_flanks1/1.0.0
1.0.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/get_flanks/get_flanks1/1.0.0 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/get_flanks/get_flanks1/0.0.1
get_flanks1
Requirements (dependencies defined in the <requirements> tag set)
name version type
bx-python 0.7.1 package
galaxy-ops 1.0.0 package
Functional tests
name inputs outputs required files
Test-1 input: flanks_inp.bed
region: whole
size: 1000
direction: Both
offset: -500
out_file1: flanks_out1.bed
flanks_inp.bed
flanks_out1.bed
Test-2 input: flanks_inp.bed
region: start
size: 1000
direction: Downstream
offset: 200
out_file1: flanks_out2.bed
flanks_inp.bed
flanks_out2.bed