Repository revision
3:a1ef6c88ee37

Repository 'ebi_metagenomics_run_downloader'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/ebi_metagenomics_run_downloader

Download run data tool metadata
Miscellaneous
from EBI Metagenomics database
ebi_metagenomics_run_downloader
toolshed.g2.bx.psu.edu/repos/iuc/ebi_metagenomics_run_downloader/ebi_metagenomics_run_downloader/0.1.0
0.1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/ebi_metagenomics_run_downloader/ebi_metagenomics_run_downloader/0.1.0 (this tool)
ebi_metagenomics_run_downloader
Requirements (dependencies defined in the <requirements> tag set)
name version type
python 2.7.12 package
xmltramp2 3.1.1 package
urllib3 1.12 package
curl 7.49.0 package
Functional tests
name inputs outputs required files
Test-1 information|type: qc-stats
information|to_download: stats
run_id: ERR675640
output_file_tsv: ERR675640_qc-stats_stats
ERR675640_qc-stats_stats
Test-2 information|type: sequences
information|to_download: PredictedCDSWithAnnotation
run_id: ERR675573
output_file_fasta: None